📊 Detailed Metadata & Sample Information

sample_name file_name SRA_accession SRA_acc_2nd_run sampling_location latitude longitude sex tissue avg_coverage publication file_size_gb species comments sra_internal_id experiment_accessions sample_accessions project_accessions bioproject_id biosample_id biosample_accession
3918 SRR1793405_sorted_dedup.bam SRR1793405 - Yanbian, Sichuan 26.473056 101.599167 Male muscle 4.34536 Qu et al. 2015 5.726426 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242865 SRX868846 SRS839646 SRP053341 PRJNA274877 SAMN03333188 SAMN03333188
4000 SRR1793406_sorted_dedup.bam SRR1793406 - Yanbian, Sichuan 24.980833 98.739167 Male muscle 4.51657 Qu et al. 2015 5.857670 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242867 SRX868848 SRS839647 SRP053341 PRJNA274877 SAMN03333189 SAMN03333189
5226 SRR1793407_sorted_dedup.bam SRR1793407 - Gaoligong, Yunnan 24.980833 98.739167 Male muscle 5.31888 Qu et al. 2015 6.475792 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242871 SRX868852 SRS839649 SRP053341 PRJNA274877 SAMN03333190 SAMN03333190
5236 SRR1793415_sorted_dedup.bam SRR1793415 - Gaoligong, Yunnan 24.980833 98.739167 Female muscle 5.36531 Qu et al. 2015 6.633108 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242877 SRX868858 SRS839651 SRP053341 PRJNA274877 SAMN03333191 SAMN03333191
5242 SRR1793417_sorted_dedup.bam SRR1793417 - Gaoligong, Yunnan 24.980833 98.739167 Male muscle 5.70718 Qu et al. 2015 6.874896 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242879 SRX868860 SRS839652 SRP053341 PRJNA274877 SAMN03333192 SAMN03333192
5332 SRR1793419_sorted_dedup.bam SRR1793419 - Gaoligong, Yunnan 24.980833 98.739167 Female muscle 5.03692 Qu et al. 2015 6.189879 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242880 SRX868861 SRS839653 SRP053341 PRJNA274877 SAMN03333193 SAMN03333193
5333 SRR1793420_sorted_dedup.bam SRR1793420 - Gaoligong, Yunnan 24.980833 98.739167 Male muscle 4.50167 Qu et al. 2015 5.879192 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242881 SRX868862 SRS839654 SRP053341 PRJNA274877 SAMN03333194 SAMN03333194
13924 SRR1793421_sorted_dedup.bam SRR1793421 - Lijiang, Yunnan 27.1 100.07 Female muscle 4.13705 Qu et al. 2015 5.816903 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242882 SRX868863 SRS839655 SRP053341 PRJNA274877 SAMN03333195 SAMN03333195
13938 SRR1793422_sorted_dedup.bam SRR1793422 - Lijiang, Yunnan 27.1 100.07 Male muscle 4.77562 Qu et al. 2015 5.920144 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242883 SRX868864 SRS839656 SRP053341 PRJNA274877 SAMN03333196 SAMN03333196
13995 SRR1793423_sorted_dedup.bam SRR1793423 - Lijiang, Yunnan 27.1 100.07 Female muscle 4.20065 Qu et al. 2015 5.624591 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242884 SRX868865 SRS839657 SRP053341 PRJNA274877 SAMN03333197 SAMN03333197
13996 SRR1793424_sorted_dedup.bam SRR1793424 - Lijiang, Yunnan 27.1 100.07 Male muscle 4.04565 Qu et al. 2015 5.351611 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242885 SRX868866 SRS839658 SRP053341 PRJNA274877 SAMN03333198 SAMN03333198
11555 SRR1793425_sorted_dedup.bam SRR1793425 - Eerguna, Inner Mongolia 51.973611 120.550556 Female muscle 4.92886 Qu et al. 2015 6.009417 Parus major - 1242886 SRX868867 SRS839659 SRP053341 PRJNA274877 SAMN03333199 SAMN03333199
11556 SRR1793427_sorted_dedup.bam SRR1793427 - Eerguna, Inner Mongolia 51.973611 120.550556 Male muscle 5.26981 Qu et al. 2015 6.813901 Parus major - 1242887 SRX868868 SRS839660 SRP053341 PRJNA274877 SAMN03333200 SAMN03333200
11557 SRR1793428_sorted_dedup.bam SRR1793428 - Eerguna, Inner Mongolia 51.973611 120.550556 Male muscle 5.05083 Qu et al. 2015 6.353468 Parus major - 1242888 SRX868869 SRS839661 SRP053341 PRJNA274877 SAMN03333201 SAMN03333201
11564 SRR1793429_sorted_dedup.bam SRR1793429 - Eerguna, Inner Mongolia 51.973611 120.550556 Female muscle 3.95867 Qu et al. 2015 5.277837 Parus major - 1242889 SRX868870 SRS839662 SRP053341 PRJNA274877 SAMN03333202 SAMN03333202
15078 SRR1793430_sorted_dedup.bam SRR1793430 - Teshig, Mongolia 50.238056 103.282222 Male muscle 4.68295 Qu et al. 2015 5.909874 Parus major - 1242890 SRX868871 SRS839663 SRP053341 PRJNA274877 SAMN03333203 SAMN03333203
15081 SRR1793431_sorted_dedup.bam SRR1793431 - Teshig, Mongolia 50.238056 103.282222 Female muscle 5.26341 Qu et al. 2015 6.821630 Parus major - 1242891 SRX868872 SRS839664 SRP053341 PRJNA274877 SAMN03333204 SAMN03333204
15100 SRR1793432_sorted_dedup.bam SRR1793432 - Tushig, Mongolia 50.520556 105.003056 Male muscle 4.36959 Qu et al. 2015 5.885731 Parus major - 1242892 SRX868873 SRS839665 SRP053341 PRJNA274877 SAMN03333205 SAMN03333205
15110 SRR1793433_sorted_dedup.bam SRR1793433 - Tushig, Mongolia 50.520556 105.003056 Male muscle 4.20124 Qu et al. 2015 5.734132 Parus major - 1242893 SRX868874 SRS839666 SRP053341 PRJNA274877 SAMN03333206 SAMN03333206
15111 SRR1793434_sorted_dedup.bam SRR1793434 - Tushig, Mongolia 50.520556 105.003056 Female muscle 4.21799 Qu et al. 2015 5.846332 Parus major - 1242894 SRX868875 SRS839667 SRP053341 PRJNA274877 SAMN03333207 SAMN03333207
17252 SRR1793435_sorted_dedup.bam SRR1793435 - Altai Region, Russia 52.0575 86.106389 Male muscle 4.94130 Qu et al. 2015 6.326963 Parus major - 1242895 SRX868876 SRS839668 SRP053341 PRJNA274877 SAMN03333208 SAMN03333208
8204 SRR1793436_sorted_dedup.bam SRR1793436 - Shennongjia, Hubei 31.88 110.92 Female muscle 4.66487 Qu et al. 2015 6.304960 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242896 SRX868877 SRS839669 SRP053341 PRJNA274877 SAMN03333209 SAMN03333209
8236 SRR1793437_sorted_dedup.bam SRR1793437 - Shennongjia, Hubei 31.88 110.92 Male muscle 4.79634 Qu et al. 2015 6.004684 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242897 SRX868878 SRS839670 SRP053341 PRJNA274877 SAMN03333210 SAMN03333210
10076 SRR1793438_sorted_dedup.bam SRR1793438 - Jixi, Anhui 30.2 115.54 Male muscle 5.07124 Qu et al. 2015 6.275785 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242898 SRX868879 SRS839671 SRP053341 PRJNA274877 SAMN03333211 SAMN03333211
10635 SRR1793439_sorted_dedup.bam SRR1793439 - Panjin, Liaoning 40.653333 121.460556 Male muscle 4.97934 Qu et al. 2015 6.282971 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242899 SRX868880 SRS839672 SRP053341 PRJNA274877 SAMN03333212 SAMN03333212
10636 SRR1793440_sorted_dedup.bam SRR1793440 - Panjin, Liaoning 40.653333 121.460556 Male muscle 4.50727 Qu et al. 2015 6.042420 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242900 SRX868881 SRS839673 SRP053341 PRJNA274877 SAMN03333213 SAMN03333213
10637 SRR1793441_sorted_dedup.bam SRR1793441 - Panjin, Liaoning 40.653333 121.460556 Male muscle 4.70569 Qu et al. 2015 6.459961 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242901 SRX868882 SRS839674 SRP053341 PRJNA274877 SAMN03333214 SAMN03333214
10732 SRR1793442_sorted_dedup.bam SRR1793442 - Kuandian, Liaoning 40.985 125.425556 Male muscle 3.85130 Qu et al. 2015 5.208526 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242902 SRX868883 SRS839675 SRP053341 PRJNA274877 SAMN03333215 SAMN03333215
10860 SRR1793443_sorted_dedup.bam SRR1793443 - Kuandian, Liaoning 40.985 125.425556 Male muscle 4.22157 Qu et al. 2015 5.882843 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242903 SRX868884 SRS839676 SRP053341 PRJNA274877 SAMN03333216 SAMN03333216
11929 SRR1793444_sorted_dedup.bam SRR1793444 - Sunan, Gansu 37.839722 102.012778 Female muscle 4.87307 Qu et al. 2015 6.548645 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242904 SRX868885 SRS839677 SRP053341 PRJNA274877 SAMN03333217 SAMN03333217
11944 SRR1793445_sorted_dedup.bam SRR1793445 - Sunan, Gansu 37.839722 102.012778 Male muscle 4.90501 Qu et al. 2015 6.484256 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242905 SRX868886 SRS839678 SRP053341 PRJNA274877 SAMN03333218 SAMN03333218
12003 SRR1793447_sorted_dedup.bam SRR1793447 - Yongdeng, Gansu 36.685556 102.736667 Female muscle 4.73453 Qu et al. 2015 6.347140 Parus minor Qu et al. 2015 and the NCBI entry call this P. major, but we consider this to be P. minor 1242906 SRX868887 SRS839679 SRP053341 PRJNA274877 SAMN03333219 SAMN03333219
1198 SRR2961328_sorted_dedup.bam SRR2961328 SRR2961673 Vienna, Austria 48.06 15.91 Female blood 14.37270 Laine et al. 2016 18.154703 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052016 SRX1452605 SRS1180333 SRP066678 PRJNA304164 SAMN04296347 SAMN04296347
973 SRR2961671_sorted_dedup.bam SRR2961671 SRR2961672 Antwerp, Belgium 51.16 4.29 Male blood 9.19169 Laine et al. 2016 11.718549 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052275 SRX1452864 SRS1180558 SRP066678 PRJNA304164 SAMN04296348 SAMN04296348
477 SRR2961674_sorted_dedup.bam SRR2961674 SRR2961675 Cambridge, UK 52.24 -0.14 Male blood 8.09247 Laine et al. 2016 10.390314 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052276 SRX1452865 SRS1180559 SRP066678 PRJNA304164 SAMN04296349 SAMN04296349
935 SRR2961676_sorted_dedup.bam SRR2961676 SRR2961677 Pirio/Muro, Corsica 42.22 8.45 Male blood 10.30880 Laine et al. 2016 11.569120 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052277 SRX1452866 SRS1180560 SRP066678 PRJNA304164 SAMN04296350 SAMN04296350
52 SRR2961678_sorted_dedup.bam SRR2961678 SRR2961679 Velky Kosr, Czech Republic 49.32 17.04 Male blood 6.83910 Laine et al. 2016 8.040349 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052278 SRX1452867 SRS1180561 SRP066678 PRJNA304164 SAMN04296351 SAMN04296351
731 SRR2961680_sorted_dedup.bam SRR2961680 SRR2961681 Tartu, Estonia 58.07 25.05 Male blood 14.92750 Laine et al. 2016 16.678124 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052281 SRX1452870 SRS1180564 SRP066678 PRJNA304164 SAMN04296352 SAMN04296352
770 SRR2961684_sorted_dedup.bam SRR2961684 SRR2961687 Tartu, Estonia 58.07 25.05 Male blood 6.69489 Laine et al. 2016 7.429218 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052282 SRX1452871 SRS1180565 SRP066678 PRJNA304164 SAMN04296353 SAMN04296353
317 SRR2961689_sorted_dedup.bam SRR2961689 SRR2961690 Oulu, Finland 65.0 25.3 Male blood 13.90100 Laine et al. 2016 15.636177 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052283 SRX1452872 SRS1180567 SRP066678 PRJNA304164 SAMN04296354 SAMN04296354
896 SRR2961695_sorted_dedup.bam SRR2961695 SRR2961696 La Rouviere, France 43.4 3.4 Male blood 9.13526 Laine et al. 2016 11.836886 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052284 SRX1452873 SRS1180566 SRP066678 PRJNA304164 SAMN04296355 SAMN04296355
233 SRR2961697_sorted_dedup.bam SRR2961697 SRR2961698 Montpellier, France 43.37 3.52 Female blood 11.32450 Laine et al. 2016 14.979545 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052285 SRX1452874 SRS1180568 SRP066678 PRJNA304164 SAMN04296356 SAMN04296356
906 SRR2961699_sorted_dedup.bam SRR2961699 SRR2961700 La Rouviere, France 43.4 3.4 Male blood 6.94818 Laine et al. 2016 8.269685 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052286 SRX1452875 SRS1180569 SRP066678 PRJNA304164 SAMN04296357 SAMN04296357
823 SRR2961701_sorted_dedup.bam SRR2961701 SRR2961704 Seewisen, Germany 47.99 11.35 Male blood 9.04726 Laine et al. 2016 10.370439 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052287 SRX1452876 SRS1180570 SRP066678 PRJNA304164 SAMN04296358 SAMN04296358
11 SRR2961712_sorted_dedup.bam SRR2961712 - Pilis Mountains, Hungary 47.43 19.1 Male blood 9.49017 Laine et al. 2016 10.576755 Parus major - 2052290 SRX1452879 SRS1180580 SRP066678 PRJNA304164 SAMN04296359 SAMN04296359
1387 SRR2961716_sorted_dedup.bam SRR2961716 SRR2961717 Tromso, Norway 69.2 19.34 Female blood 11.53070 Laine et al. 2016 14.860327 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052301 SRX1452890 SRS1180583 SRP066678 PRJNA304164 SAMN04296360 SAMN04296360
1376 SRR2961718_sorted_dedup.bam SRR2961718 SRR2961719 Groblas, Poland 50.06 20.25 Female blood 4.79463 Laine et al. 2016 6.305111 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052302 SRX1452891 SRS1180584 SRP066678 PRJNA304164 SAMN04296361 SAMN04296361
235 SRR2961722_sorted_dedup.bam SRR2961722 SRR2961723 Loch Lomond, Scotland 56.08 -4.37 Male blood 9.09326 Laine et al. 2016 10.251605 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052305 SRX1452894 SRS1180587 SRP066678 PRJNA304164 SAMN04296362 SAMN04296362
1280 SRR2961725_sorted_dedup.bam SRR2961725 SRR2961727 Mariola, Spain 38.44 -0.33 Male blood 6.91358 Laine et al. 2016 8.971415 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052308 SRX1452897 SRS1180590 SRP066678 PRJNA304164 SAMN04296363 SAMN04296363
1235 SRR2961728_sorted_dedup.bam SRR2961728 SRR2961729 Font Roja, Spain 38.39 -0.32 Male blood 8.41654 Laine et al. 2016 9.907472 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052310 SRX1452899 SRS1180591 SRP066678 PRJNA304164 SAMN04296364 SAMN04296364
105 SRR2961731_sorted_dedup.bam SRR2961731 SRR2961733 Gotland, Sweden 57.05 18.18 Male blood 9.56733 Laine et al. 2016 11.079908 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052312 SRX1452901 SRS1180594 SRP066678 PRJNA304164 SAMN04296365 SAMN04296365
836 SRR2961736_sorted_dedup.bam SRR2961736 SRR2961737 - - - Male blood 13.21220 Laine et al. 2016 14.439001 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052315 SRX1452904 SRS1180598 SRP066678 PRJNA304164 SAMN04296376 SAMN04296376
TL38228 SRR2961746_sorted_dedup.bam SRR2961746 SRR2961748 Wytham Woods, Oxford, Uk 51.77 -1.34 Male blood 8.56293 Laine et al. 2016 9.881548 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052323 SRX1452912 SRS1180607 SRP066678 PRJNA304164 SAMN04296366 SAMN04296366
TL38138 SRR2961750_sorted_dedup.bam SRR2961750 SRR2961752 Wytham Woods, Oxford, Uk 51.77 -1.34 Male blood 8.73808 Laine et al. 2016 10.121383 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052328 SRX1452917 SRS1180610 SRP066678 PRJNA304164 SAMN04296367 SAMN04296367
TL38197 SRR2961753_sorted_dedup.bam SRR2961753 SRR2961754 Wytham Woods, Oxford, Uk 51.77 -1.34 Male blood 9.82644 Laine et al. 2016 11.640025 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052331 SRX1452920 SRS1180613 SRP066678 PRJNA304164 SAMN04296368 SAMN04296368
TL38174 SRR2961756_sorted_dedup.bam SRR2961756 SRR2961758 Wytham Woods, Oxford, Uk 51.77 -1.34 Female blood 11.66980 Laine et al. 2016 15.033041 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052334 SRX1452923 SRS1180616 SRP066678 PRJNA304164 SAMN04296369 SAMN04296369
TL38215 SRR2961759_sorted_dedup.bam SRR2961759 SRR2961760 Wytham Woods, Oxford, Uk 51.77 -1.34 Male blood 7.81236 Laine et al. 2016 9.193990 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052336 SRX1452925 SRS1180618 SRP066678 PRJNA304164 SAMN04296370 SAMN04296370
TL38187 SRR2961762_sorted_dedup.bam SRR2961762 SRR2961763 Wytham Woods, Oxford, Uk 51.77 -1.34 Female blood 8.85625 Laine et al. 2016 10.294449 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052337 SRX1452926 SRS1180620 SRP066678 PRJNA304164 SAMN04296371 SAMN04296371
TL39629 SRR2961765_sorted_dedup.bam SRR2961765 SRR2961767 Wytham Woods, Oxford, Uk 51.77 -1.34 Male blood 7.33943 Laine et al. 2016 8.266873 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052340 SRX1452929 SRS1180623 SRP066678 PRJNA304164 SAMN04296372 SAMN04296372
TL39600 SRR2961769_sorted_dedup.bam SRR2961769 SRR2961771 Wytham Woods, Oxford, Uk 51.77 -1.34 Female blood 9.20385 Laine et al. 2016 10.807727 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052343 SRX1452932 SRS1180626 SRP066678 PRJNA304164 SAMN04296373 SAMN04296373
TL39399 SRR2961773_sorted_dedup.bam SRR2961773 SRR2961774 Wytham Woods, Oxford, Uk 51.77 -1.34 Male blood 12.03990 Laine et al. 2016 14.042457 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052346 SRX1452935 SRS1180628 SRP066678 PRJNA304164 SAMN04296374 SAMN04296374
TL39490 SRR2961775_sorted_dedup.bam SRR2961775 SRR2961776 Wytham Woods, Oxford, Uk 51.77 -1.34 Female blood 6.65298 Laine et al. 2016 8.064323 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2052347 SRX1452936 SRS1180629 SRP066678 PRJNA304164 SAMN04296375 SAMN04296375
GT_RawGenomeReads SRR3085443_sorted_dedup.bam SRR3085443 SRR3085445 Animal Breeding and Genomics Centre, Wageningen, The Netherlands 51.99 5.67 Male blood 18.61960 Laine et al. 2016 31.752467 Parus major fastq files from two sequencing runs of the same sample were merged for mapping (see SRA_acc_2nd_run column) 2145250 SRX1517152 SRS1185780 SRP055861 PRJNA208335 SAMN04306664 SAMN04306664
TR44666 SRR5423293_sorted_dedup.bam SRR5423293 - Oxford, Great Britain 51.77 -1.34 Male blood 52.70510 Corcoran et al. 2017 35.592411 Parus major - 3916173 SRX2714714 SRS2105685 SRP103218 PRJNA381923 SAMN06692363 SAMN06692363
943 SRR5423294_sorted_dedup.bam SRR5423294 - Pirio/Muro, Corsica, France 42.22 8.45 Male blood 57.53910 Corcoran et al. 2017 33.868168 Parus major - 3916174 SRX2714715 SRS2105686 SRP103218 PRJNA381923 SAMN06692362 SAMN06692362
917 SRR5423295_sorted_dedup.bam SRR5423295 - La Rouviere, France 43.4 3.4 Male blood 49.14740 Corcoran et al. 2017 43.461356 Parus major - 3916175 SRX2714716 SRS2105687 SRP103218 PRJNA381923 SAMN06692361 SAMN06692361
61 SRR5423296_sorted_dedup.bam SRR5423296 - Velky Kosr, Czech Republic 49.32 17.04 Male blood 53.98960 Corcoran et al. 2017 47.638769 Parus major - 3916176 SRX2714717 SRS2105688 SRP103218 PRJNA381923 SAMN06692360 SAMN06692360
318 SRR5423297_sorted_dedup.bam SRR5423297 - Oulu, Finland 65.0 25.3 Male blood 63.24480 Corcoran et al. 2017 54.628844 Parus major - 3916177 SRX2714718 SRS2105689 SRP103218 PRJNA381923 SAMN06692359 SAMN06692359
249 SRR5423298_sorted_dedup.bam SRR5423298 - Loch Lomond, Scotland 56.08 -4.37 Male blood 54.16340 Corcoran et al. 2017 34.024789 Parus major - 3916178 SRX2714719 SRS2105690 SRP103218 PRJNA381923 SAMN06692358 SAMN06692358
167 SRR5423299_sorted_dedup.bam SRR5423299 - Gotland, Sweden 57.05 18.18 Male blood 54.51260 Corcoran et al. 2017 48.486643 Parus major - 3916179 SRX2714720 SRS2105691 SRP103218 PRJNA381923 SAMN06692357 SAMN06692357
15 SRR5423300_sorted_dedup.bam SRR5423300 - Pilis Mountains, Hungary 47.43 19.1 Male blood 59.92950 Corcoran et al. 2017 52.883045 Parus major - 3916180 SRX2714721 SRS2105692 SRP103218 PRJNA381923 SAMN06692356 SAMN06692356
1485 SRR5423301_sorted_dedup.bam SRR5423301 - Austria 48.06 15.91 Male blood 52.21680 Corcoran et al. 2017 36.520846 Parus major - 3916181 SRX2714722 SRS2105693 SRP103218 PRJNA381923 SAMN06692355 SAMN06692355
1280 SRR5423302_sorted_dedup.bam SRR5423302 - Mariola, Spain 38.44 -0.33 Male blood 51.80250 Corcoran et al. 2017 49.799602 Parus major - 3916182 SRX2714723 SRS2105694 SRP103218 PRJNA381923 SAMN06692354 SAMN06692354
Great tit 500bp SRR765717_sorted_dedup.bam SRR765717 - Lijiang, Yunnan, China 26.904109 100.247189 Female liver 12.62800 Qu et al. 2013 16.235798 Parus minor Qu et al. 2013 and the NCBI entry call this P. major, but we consider this to be P. minor 336837 SRX245721 SRS398273 SRP018733 PRJNA179234 SAMN01925483 SAMN01925483
B041 SRR9656355_sorted_dedup.bam SRR9656355 - Foping, Shanxi 33.524599 107.987323 Male muscle 15.98280 Cheng et al. 2020; Cheng et al. 2021 11.902771 Parus minor Cheng et al. 2020 and Cheng et al. 2021, and the NCBI entry call this P. major, but we consider this to be P. minor 8501145 SRX6417671 SRS5074660 SRP213766 PRJNA553273 SAMN12233385 SAMN12233385
GZ10358 SRR9656356_sorted_dedup.bam SRR9656356 - Libo, Guizhou 25.266179 108.054464 Female muscle 11.89660 Cheng et al. 2020; Cheng et al. 2021 10.703262 Parus minor Cheng et al. 2020 and Cheng et al. 2021, and the NCBI entry call this P. major, but we consider this to be P. minor 8501144 SRX6417670 SRS5074659 SRP213766 PRJNA553273 SAMN12233384 SAMN12233384
B1059 SRR9656357_sorted_dedup.bam SRR9656357 - Chaoan, Guangdong 23.714069 116.542572 Male muscle 13.39840 Cheng et al. 2020; Cheng et al. 2021 11.785235 Parus minor Cheng et al. 2020 and Cheng et al. 2021, and the NCBI entry call this P. major, but we consider this to be P. minor 8501143 SRX6417669 SRS5074658 SRP213766 PRJNA553273 SAMN12233383 SAMN12233383
BS09166 SRR9656367_sorted_dedup.bam SRR9656367 - Baishan, Jilin 41.861011 126.529325 Male muscle 12.91300 Cheng et al. 2020; Cheng et al. 2021 11.295358 Parus minor Cheng et al. 2020 and Cheng et al. 2021, and the NCBI entry call this P. major, but we consider this to be P. minor 8501133 SRX6417659 SRS5074648 SRP213766 PRJNA553273 SAMN12233386 SAMN12233386
14BJ51 SRR9656368_sorted_dedup.bam SRR9656368 - Huairou, Beijing 40.3778 116.6782 Female muscle 15.94580 Cheng et al. 2020; Cheng et al. 2021 14.082862 Parus minor Cheng et al. 2020 and Cheng et al. 2021, and the NCBI entry call this P. major, but we consider this to be P. minor 8501132 SRX6417658 SRS5074647 SRP213766 PRJNA553273 SAMN12233387 SAMN12233387
1-E8 SRR9656369_sorted_dedup.bam SRR9656369 - Mangkang, Tibet 29.273316 98.691881 Male muscle 14.80090 Cheng et al. 2020; Cheng et al. 2021 11.392058 Parus minor Cheng et al. 2020 and Cheng et al. 2021, and the NCBI entry call this P. major, but we consider this to be P. minor 8501131 SRX6417657 SRS5074646 SRP213766 PRJNA553273 SAMN12233388 SAMN12233388